There is a medium size new update fixing several of the issues reported.
Summary:
Corrected the Carthaginians VPs tally count on turn 5.
Removed repeated text in log (turn 6).
Fixed a bug where Nations vassalized twice in the same turn would give double VPs.
Several typos reported are now fixed.
Transformation of Iberians now works as designed.
Adjusted and corrected Franks VPs count on turn 9.
Adjusted and corrected Omayyads VPs on turn 12.
Crusaders are now correctly removed from the map.
Almohads can no longer build castles.
Almohads religious bonus is now working correctly.