We hear your feedback and are working hard to fix as much as we can.
After tweaking controller settings we found that Steam Input "Gamepad with Camera Control" works the best.
We made this setting to be the default one. If you have disabled Steam Input please select "Use default settings". (Steam restart might be required.)
This option also requires you to disable "Raw Input" inside of the game.
We will be posting a new patch later today that address some of the common issues players had.