There were a couple notable bugs that needed fixing in yesterday's Velle Update. The bugs have been fixed and there's even a new feature when using scanner drones to hint at possibly interesting locations.
http://steamcommunity.com/sharedfiles/filedetails/?id=656944836
From the changelog:
[+++] Minimap shows whether a dungeon room's item has been obtained
[+++] Scanner drones reveal hints about interesting stuff like possible dungeons, caves, stores, items and switches
[+++] Intro text and dialogue from characters stay on the screen for a little longer
[FIX] Fixed a bug which could cause a dungeon to be incompletable if taking a shortcut path
[FIX] Fixed mountains being invisible on Windows
[FIX] Fixed buttons showing as keyboard instead of controller on Windows
Cheers,
Nathanael